PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK15192.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family MYB_related
Protein Properties Length: 75aa    MW: 9068.36 Da    PI: 10.8424
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK15192.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.9e-132573247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                     +rW+  E++ l d+v+++G g+Wk+I +      + Rt+ ++k++w++ 
        PK15192.2 25 KRWSLLEEDTLRDGVNKYGRGNWKLILNSYSdifEERTEVDLKDKWRNM 73
                     69********************************9************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.7111975IPR017930Myb domain
SuperFamilySSF466891.57E-152174IPR009057Homeodomain-like
SMARTSM007174.0E-42375IPR001005SANT/Myb domain
PfamPF002492.5E-102573IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.9E-132575IPR009057Homeodomain-like
CDDcd116606.71E-172575No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
XPKIKVVSPL KKYAPTKILK RRKVKRWSLL EEDTLRDGVN KYGRGNWKLI LNSYSDIFEE  60
RTEVDLKDKW RNMTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11622KILKRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008366280.12e-34PREDICTED: telomeric repeat-binding factor 1-like
RefseqXP_009374383.14e-32PREDICTED: uncharacterized protein LOC103963301
RefseqXP_007207092.14e-32hypothetical protein PRUPE_ppa023474mg
TrEMBLM5W4N54e-32M5W4N5_PRUPE; Uncharacterized protein
STRINGVIT_06s0004g08050.t012e-30(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.21e-14MYB_related family protein